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All EMBO Press journals Open Access as of 1 January 2024 - read the FAQs
Interferons induce a ZBP1-S isoform that competitively interacts with endogenous Z-RNAs and thereby suppresses ZBP1-induced necroptosis and inflammation.
In vivo imaging uncovers regional differences and spatiotemporal dynamics of basal mitophagy and macroautophagy in neuronal and non-neuronal cells of the aging mouse brain.
A recent study shows that p21 (CDKN1A) regulates expression of extracellular matrix components by senescent cells, promoting tissue fibrosis and immune cell infiltration.
Glutamylase TTLL11 catalyzes a novel type of carboxy-terminal polyglutamylation to suppress DVL3 phase separation and enhance its activity in the planar cell polarity pathway.
Iburg at al develop a high-throughput in vivo screen to construct a comprehensive map of the interactions among all 11 proteins of the pNL29 gas vesicle operon.
Significant advances in structural and biochemical research validate the 9-year-old hypothesis that cardiac hypercontractility seen in patients with hypertrophic cardiomyopathy is primarily caused by sarcomeric mutations that increase the number of myosin molecules available for actin interaction.
Swi5-Sfr1 restriction ensures homolog invasions are dismantled in a timely manner to guarantee proper chromosome distribution and faithful genome transmission into the meiotic products.
Novel p53 knock-in and p53 target gene mouse strains enable interaction proteomics, DNA binding studies, as well as the imaging of p53 contributions to cell cycle arrest and apoptosis in situ.
Insulin-responsive GLUT4 secretion requires a designated clathrin isoform, CHC22, which is specifically recruited through its interactions with the trafficking proteins p115 and SNX5.
Combined with proteomics and quantitative lipidomics, this method for purification of specific yeast membranes establishes molecular fingerprints of membrane-based forms of endoplasmic reticulum (ER) stress.
Genome-wide i-motif immunoprecipitation and next-generation sequencing shows that sequences capable of forming these knot-like DNA structures are widely distributed and common in G0/G1-expressed genes.
As part of a metabolism methods advice series, this commentary highlights frequent pitfalls and offers guidance related to designing, processing, and communicating metabolomics analyses.
A user-friendly predictor correlates propensity for phase separation with key biophysical features, and can be applied to study phytobacterial type III effectors.
This review summarises emerging views on how differentiated cells become cancer cells and contribute to malignancies due to accumulating mutations, aberrant tissue repair programs and hijacked cell state plasticity.
This cover highlights the article Elucidating the Assembly of Gas Vesicles by Systematic Protein-Protein Interaction Analysis by Manuel Iburg, Andrew P. Anderson, George J. Lu and colleagues. Gas vesicles are a class of air-filled microbial organelles that are assembled from individual proteins in a multi-step process, depicted as an assembly line in this cartoon art. Starting from the top left corner, several proteins (represented as red and blue balls) form the initial diamond-shaped structures. As additional shell proteins (red balls) are fed into the assembly line, the structure grows into longer, submarine-shaped mature gas vesicles. Finally, more proteins (blue balls) attach to the outside, causing them to cluster, symbolized by the pile at the bottom. Various other proteins, depicted as workers around the assembly line, facilitate the process. The protein-protein interaction map (illustrated on the wall) marks one of the first steps to understanding this assembly process.
Cover concept by the authors; scientific illustration by Chongqing Huayan-tech
Heidi M Blank, Staci E Hammer, Laurel Boatright, Courtney Roberts, Katarina E Heyden, Aravindh Nagarajan, Mitsuhiro Tsuchiya, Marcel Brun, Charles D Johnson, Patrick J Stover, Raquel Sitcheran, Brian K Kennedy, L Garry Adams, Matt Kaeberlein, Martha S Field, David W Threadgill, Helene L Andrews-Polymenis, Michael Polymenis
The ubiquitin ligase FBXO38 does not regulate the levels of the PD-1 receptor in T cells, indicating that factors other than PD-1 regulate the anti-tumor responses downstream of FBXO38.
A proximity proteomics pipeline is developed for mapping subcellular proteomes and characterizing spatiotemporally resolved proximal interaction networks, ensuring improved throughput and reproducible quantification.
ASC scaffolds and cross-seeds Aβ amyloid and is considered an actionable target against Alzheimer’s disease. This study investigated the role of ASC in amyloid A (AA) amyloidosis, a systemic disease in which serum amyloid A (SAA) aggregates invade internal organs due to chronic inflammation.